RPS-BLAST 2.2.9 [May-01-2004]
Query= local sequence: lcl|tmpseq_0 unnamed protein product
(121 letters)
Database: cdd.v2.00
| PSSMs producing significant alignments: |
Score
(bits) |
E
value |
| |
| gnl|CDD|26224 |
pfam04266, DUF437, Protein of unknown function (DUF437). Archa... |
56.8 |
6e-10 |
gnl|CDD|26224, pfam04266, DUF437, Protein of unknown function (DUF437). Archaeal protein of unknown function.
CD-Length = 102 residues, 97.1% aligned
Score = 56.8 bits (137), Expect = 6e-10
Query: 7 GLIVREPYASLIVDGRKVWEIRRR-KTRHRGPLGIVSGGRLIGQADLVGVEGPFSVEELL 65
Sbjct: 3 HLEFDGKYAKKIIEGEKRTTIRRKIVLKPGGEVYIHSGGKALGKAEIKDVKTKRVSELTD 62
Query: 66 --AHQEKHLAEEAFLRAYAKDEP-LYAWVLENAFRYEKP 101
Sbjct: 63 EDARLDGFRSREELIKALKRIYGDLRDEDIVTIVEFEVV 101
Citing CD-Search:
Marchler-Bauer A, Anderson JB, DeWeese-Scott C, Fedorova ND, Geer LY, He S, Hurwitz DI, Jackson JD, Jacobs AR,
Lanczycki CJ, Liebert CA, Liu C, Madej T, Marchler GH, Mazumder R, Nikolskaya AN, Panchenko AR, Rao BS, Shoemaker BA,
Simonyan V, Song JS, Thiessen PA, Vasudevan S, Wang Y, Yamashita RA, Yin JJ, and Bryant SH (2003),
"CDD: a curated Entrez database of conserved domain alignments",
Nucleic Acids Res. 31:383-387.
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